NEWS
FounderForge 0.1.0
- First release.
- Point-and-click Shiny wizard to prepare marker data (VCF, HapMap, numeric
matrices, PLINK) as an AlphaSimR founder population.
- Quality-control review, flexible filtering (MAF, missingness, monomorphic
markers, minimum SNPs per chromosome, individual dropping), optional additive
trait definition, and optional before/after PCA validation.
- Organised, timestamped outputs (
genmap.rds, haplotypes.rds,
founder_pop.rds, optional sim_param.rds, a reproducible rebuild_snippet.R,
QC/validation plots and a full run log).