Package: FounderForge Title: Prepare Marker Data as AlphaSimR Founder Populations Version: 0.1.0 Authors@R: person(given = "Ebenezer", family = "Ogoe", role = c("aut", "cre"), email = "ebenezerogoe@gmail.com") Description: A point-and-click Shiny application that helps non-programmers prepare their own marker data (VCF, HapMap, numeric genotype matrices or PLINK) as a founder population for AlphaSimR simulations. It guides users through uploading data, quality-control review, filtering (MAF, missingness, monomorphic markers), optional trait definition and export of the objects required by AlphaSimR::newMapPop(), with progress feedback, helpful errors, optional before/after PCA validation and a full text log of the run. License: MIT + file LICENSE URL: https://ebenogoe.github.io/FounderForge/, https://github.com/ebenogoe/FounderForge BugReports: https://github.com/ebenogoe/FounderForge/issues Depends: R (>= 3.5.0) Imports: AlphaSimR, bsicons, bslib, config (>= 0.3.1), data.table, DT, ggplot2, golem (>= 0.5.1), rlang, shiny (>= 1.7.0), shinybusy, shinyFiles, shinyWidgets, stats, utils, vcfR Suggests: patchwork, testthat (>= 3.0.0) Encoding: UTF-8 Language: en-US RoxygenNote: 7.3.3 Config/testthat/edition: 3 Config/pak/sysreqs: cmake make libicu-dev libuv1-dev zlib1g-dev Repository: https://ebenogoe.r-universe.dev Date/Publication: 2026-06-21 16:20:22 UTC RemoteUrl: https://github.com/ebenogoe/FounderForge RemoteRef: HEAD RemoteSha: 03806def384805ffee26246553e19820e487b821 NeedsCompilation: no Packaged: 2026-10-20 08:11:23 UTC; root Author: Ebenezer Ogoe [aut, cre] Maintainer: Ebenezer Ogoe